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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810714.1_cds_XP_016496329.1_10562
CDS Infomation

[gene=LOC107815286] [db_xref=GeneID:107815286] [protein=alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like] [protein_id=XP_016496329.1] [location=join(17718..17930,19761..19991,21083..21253,21408..21551,21663..21842,22185..22410,22641..22754,22847..22933,23112..23155)] [gbkey=CDS]
Sequence

ATGGCGTTACAGAGGAAATTACTAAAAGGGTGTGCTGGAATTGCCAAATATAGGTGGTTG
AGGTACTTTTCCGGTCAAGCAGTGGTGGCGCCGCCCGAACTGCCGCCGTTTGACTACCAG
CCAAAGCCGTATAAAGGGCCTTTGGCTGATGAGGTTTTGGAGAAAAGAAAGAAGTTTTTG
GGTCCTTCCCTCTTCTACTACTACCAAAAACCTCTAAATATTGTTGAGGGGAAGATGCAA
TATTTGTATGATGAGAATGGAAGACGTTATCTTGATGCTTTTGCTGGAATAGTTACTGTC
TCATGTGGTCATTGTCATCCTGTGGTGTTGGATGCCATCACGGAGCAAAGCAAGCTTCTC
CAACATGCTACAACCATATATTTACATCATGCGATCGGCGATTTTGCGGAGGCATTGGCA
TCTAAGATGCCAGGAAACCTAAAGGTAGTATATTTCGTAAATTCAGGGACAGAAGCAAAT
GAATTAGCGATGCTGATGGCACGACTGTACAGTGGTAACCTAAATATGATTGCCTTGAGG
AATGCATATCATGGCGGAAGCGCTAACACAATTGGGCTAACTGCTCTTAACACATGGAAG
TACCCTATTCCACAGGGTGAAATCCATCACGTTCTGAATCCTAACCCATATCGTGGAGTA
TTCGGATCTGATGCTAAACGATATGCTGAAGATGTACAGGATCACATTGATCATGGTACT
TCAGGAAAGGTTGCTGGTTTTATTGCTGAGACAATTCAGGGGGTTGGAGGAGCAGTTGAA
CTAGCCCCTGGATACTTGAAGTTGGTTTATGACATTGTTCGCAAAGCAGGAGGTGTTTGT
ATTGCTGATGAAGTTCAAACTGGCTTTGGTCGCACAGGAAGCGACTTCTGGGGTTTTCAG
ACACAGGGTGTGATTCCTGATATAGTTACAATGGCAAAGGGTATTGGAAATGGTTTGCCA
CTTGGAGCTGTTGTCACAACGCCAGAAATTGCAAGTGTTATGGCTCAAAAGATACAATTT
AATACATATGGGGGGAACCCTGTTTGCTCTGCTGGTGGACATGCAGTACTCAGAGTTATT
GATAAGGAACAACGCCAAAAGCATTGTGCTGATGTTGGCTCACACTTAATTGGGCGGCTG
AGGGATCTACAGAAAAGACACGGCATAATTGGAGATGTGAGAGGCAGGGGTTTAATGGTT
GGTATCGAACTCGTAACTGACAGAAAAGAGAAGACACCCGCCAAGGCAGAAACTGGAGTT
CTCTTTGAGAAGCTTAGAGAACTTGGTGTTCTTGTGGGGAAAGGTGGTTTAAATGGAAAT
GTTTTCAGAATAAAACCTCCCATGTGTTTCAACAAAGATGATGCAGACTTCCTAGTTGAT
GCATTGGACTATTCAATTTCAAAGTTGTGA

Peptide Sequence

PEP ID

XP_016496329.1
PEP Infomation

PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like [Nicotiana tabacum]
Sequence

MALQRKLLKGCAGIAKYRWLRYFSGQAVVAPPELPPFDYQPKPYKGPLADEVLEKRKKFL
GPSLFYYYQKPLNIVEGKMQYLYDENGRRYLDAFAGIVTVSCGHCHPVVLDAITEQSKLL
QHATTIYLHHAIGDFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLYSGNLNMIALR
NAYHGGSANTIGLTALNTWKYPIPQGEIHHVLNPNPYRGVFGSDAKRYAEDVQDHIDHGT
SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSDFWGFQ
TQGVIPDIVTMAKGIGNGLPLGAVVTTPEIASVMAQKIQFNTYGGNPVCSAGGHAVLRVI
DKEQRQKHCADVGSHLIGRLRDLQKRHGIIGDVRGRGLMVGIELVTDRKEKTPAKAETGV
LFEKLRELGVLVGKGGLNGNVFRIKPPMCFNKDDADFLVDALDYSISKL

Transcript Sequence

Gene sequence data has not been registered.